Welcome to My New Bioinformatics Blog
Bix Command line
Trimmomatic Module: module load app/ Trimmomatic/0.36 Run Software: PE data – writing to a directory called “trimmed” : java -jar /apps/Trimmomatic/0.36/trimmomatic-0.36.jar PE Read1.fq Read2.fq trimmed/Read1_trim_p.fq trimmed/Read1_trim_unp.fq trimmed/Read2_trim_p.fq trimmed/Read2_trim_unp.fq …….. ”options” SE data – writing to a directory called “trimmed” : java -jar /apps/Trimmomatic/0.36/trimmomatic-0.36.jar SE Read1.fq Read1_trimm.fq …………. “options” Options: SLIDINGWINDOW:3:20 ILLUMINACLIP: TruSeq3-SE:2:30:10 Velvet Module: module…
My First Blog Post
Be yourself; Everyone else is already taken. — Oscar Wilde. This is the first post on my new blog. I’m just getting this new blog going, so stay tuned for more. Subscribe below to get notified when I post new updates.
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BIX King 